EnhancerDB
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  3. rs188708890[chr6:107200403]
Enhancers that have rs188708890[chr6:107200403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs188708890[chr6:107200403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107200387 107200406 CTCF JASPAR yes 104066477
chr6 107200395 107200415 RREB1 JASPAR yes 104066478
chr6 107200396 107200410 GLIS2 JASPAR yes 104066479
chr6 107200396 107200417 ZNF263 JASPAR yes 104066480
chr6 107200399 107200404 SP1 TRANSFAC yes 104066481
chr6 107200399 107200405 SP1 TRANSFAC yes 104066482
chr6 107200399 107200409 SP1 JASPAR yes 104066483
chr6 107200400 107200410 SP1 JASPAR yes 104066484
chr6 107200400 107200410 ZNF740 JASPAR yes 104066485
chr6 107200400 107200420 RREB1 JASPAR yes 104066486
chr6 107200402 107200422 RREB1 JASPAR yes 104066487
chr6 107200403 107200417 PLAG1 JASPAR yes 104066488
Genes associated with rs188708890[chr6:107200403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More