EnhancerDB
  1. Home
  2. SNP
  3. rs1887549[chr1:110330199]
Enhancers that have rs1887549[chr1:110330199]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1887549[chr1:110330199]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110329902 110330621 ZNF274 GTRD no Bone Marrow (K562) 21327147
chr1 110329931 110330327 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327148
chr1 110329940 110330212 ZNF143 GTRD no Epithelial (MCF-7) 21327149
chr1 110329984 110330488 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327150
chr1 110330002 110330386 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327151
chr1 110330121 110330461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327152
chr1 110330138 110330651 ZNF274 GTRD no Liver (HepG2) 21327153
chr1 110330142 110330472 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327154
chr1 110330190 110330446 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327155
chr1 110330191 110330200 ZEB1 JASPAR yes 31438343
chr1 110330194 110330199 USF2 TRANSFAC yes 31438344
Genes associated with rs1887549[chr1:110330199], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More