EnhancerDB
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  3. rs188755821[chr17:55454046]
Enhancers that have rs188755821[chr17:55454046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188755821[chr17:55454046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55454036 55454050 FOXF2 JASPAR yes 54948361
chr17 55454038 55454048 HOXA13 JASPAR yes 54948362
chr17 55454038 55454048 HOXD13 JASPAR yes 54948363
chr17 55454038 55454049 HOXC13 JASPAR yes 54948364
chr17 55454038 55454049 HOXD12 JASPAR yes 54948365
chr17 55454045 55454057 NHLH1 JASPAR yes 54948366
chr17 55454045 55454063 NFYA JASPAR yes 54948367
chr17 55454046 55454056 NHLH1 JASPAR yes 54948368
chr17 55454046 55454056 TFAP4 JASPAR yes 54948369
Genes associated with rs188755821[chr17:55454046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More