EnhancerDB
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  3. rs188796602[chr12:50969846]
Enhancers that have rs188796602[chr12:50969846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50954380 50971535 enh2347
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188796602[chr12:50969846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50969843 50969854 FOXC1 JASPAR yes 120846300
chr12 50969844 50969848 YY1 TRANSFAC yes 120846301
chr12 50969845 50969860 FOXP1 JASPAR yes 120846302
chr12 50969845 50969866 IRF1 JASPAR yes 120846303
Genes associated with rs188796602[chr12:50969846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More