EnhancerDB
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  3. rs188832940[chr1:234793774]
Enhancers that have rs188832940[chr1:234793774]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs188832940[chr1:234793774]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881373
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881374
chr1 234793432 234793788 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107881411
chr1 234793733 234794383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395580
chr1 234793733 234794383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881412
Genes associated with rs188832940[chr1:234793774], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More