EnhancerDB
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  3. rs188861381[chr1:225635725]
Enhancers that have rs188861381[chr1:225635725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188861381[chr1:225635725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225635616 225636051 ZBTB33 GTRD no Brain (SK-N-SH) 21384730
chr1 225635624 225636006 ZBTB33 GTRD no Brain (SK-N-SH) 21384731
chr1 225635640 225635996 ZBTB33 GTRD no Brain (SK-N-SH) 21384732
chr1 225635721 225635731 HOXA13 JASPAR yes 35741355
chr1 225635721 225635731 HOXB13 JASPAR yes 35741356
chr1 225635721 225635731 HOXD13 JASPAR yes 35741357
chr1 225635721 225635732 HOXA10 JASPAR yes 35741358
chr1 225635722 225635731 CDX1 JASPAR yes 35741359
chr1 225635722 225635733 CDX2 JASPAR yes 35741360
Genes associated with rs188861381[chr1:225635725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More