EnhancerDB
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  3. rs188868394[chr16:87513196]
Enhancers that have rs188868394[chr16:87513196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188868394[chr16:87513196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87513187 87513197 ALX3 JASPAR yes 12220813
chr16 87513187 87513197 EMX1 JASPAR yes 12220814
chr16 87513187 87513197 GSX1 JASPAR yes 12220815
chr16 87513187 87513197 GSX2 JASPAR yes 12220816
chr16 87513187 87513197 HOXB2 JASPAR yes 12220817
chr16 87513187 87513197 HOXB3 JASPAR yes 12220818
chr16 87513187 87513197 LBX2 JASPAR yes 12220819
chr16 87513187 87513197 LHX2 JASPAR yes 12220820
chr16 87513187 87513197 MEOX1 JASPAR yes 12220821
chr16 87513187 87513197 MEOX2 JASPAR yes 12220822
chr16 87513187 87513197 MIXL1 JASPAR yes 12220823
chr16 87513187 87513197 MNX1 JASPAR yes 12220824
chr16 87513187 87513197 NOTO JASPAR yes 12220825
chr16 87513188 87513196 BSX JASPAR yes 12220826
chr16 87513188 87513196 DLX6 JASPAR yes 12220827
chr16 87513188 87513196 EN1 JASPAR yes 12220828
chr16 87513188 87513196 ISX JASPAR yes 12220829
chr16 87513188 87513196 LBX1 JASPAR yes 12220830
chr16 87513188 87513196 LHX9 JASPAR yes 12220831
chr16 87513188 87513196 LMX1A JASPAR yes 12220832
chr16 87513188 87513196 LMX1B JASPAR yes 12220833
chr16 87513188 87513196 NKX6-1 JASPAR yes 12220834
chr16 87513188 87513196 NKX6-2 JASPAR yes 12220835
chr16 87513188 87513196 PAX4 JASPAR yes 12220836
chr16 87513188 87513196 PDX1 JASPAR yes 12220837
chr16 87513188 87513196 PRRX1 JASPAR yes 12220838
chr16 87513188 87513196 RAX2 JASPAR yes 12220839
chr16 87513188 87513196 SHOX JASPAR yes 12220840
chr16 87513188 87513196 UNCX JASPAR yes 12220841
chr16 87513188 87513196 VAX1 JASPAR yes 12220842
chr16 87513188 87513196 VAX2 JASPAR yes 12220843
chr16 87513188 87513196 VSX1 JASPAR yes 12220844
chr16 87513188 87513196 VSX2 JASPAR yes 12220845
chr16 87513189 87513201 POU3F2 JASPAR yes 12220846
chr16 87513192 87513206 JUN JASPAR yes 12220847
chr16 87513194 87513205 BATF JASPAR yes 12220848
chr16 87513195 87513206 FOSL2 JASPAR yes 12220849
Genes associated with rs188868394[chr16:87513196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More