EnhancerDB
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  3. rs188882295[chr1:25042575]
Enhancers that have rs188882295[chr1:25042575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188882295[chr1:25042575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25042572 25042581 ZEB1 JASPAR yes 27522253
chr1 25042573 25042583 ID4 JASPAR yes 27522254
chr1 25042573 25042583 TCF3 JASPAR yes 27522255
chr1 25042573 25042583 TCF4 JASPAR yes 27522256
chr1 25042574 25042583 SNAI2 JASPAR yes 27522257
chr1 25042575 25042580 USF2 TRANSFAC yes 27522258
Genes associated with rs188882295[chr1:25042575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More