EnhancerDB
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  3. rs188889742[chr1:52117289]
Enhancers that have rs188889742[chr1:52117289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188889742[chr1:52117289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52117274 52117295 IRF1 JASPAR yes 28859871
chr1 52117275 52117295 RREB1 JASPAR yes 28859872
chr1 52117278 52117293 FOXP1 JASPAR yes 28859873
chr1 52117285 52117297 FOXC2 JASPAR yes 28859874
chr1 52117286 52117304 NR3C1 JASPAR yes 28859875
Genes associated with rs188889742[chr1:52117289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More