EnhancerDB
  1. Home
  2. SNP
  3. rs188905696[chr3:128955309]
Enhancers that have rs188905696[chr3:128955309]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 128941525 128955643 enh7525
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs188905696[chr3:128955309]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 128955295 128955314 PITX2 TRANSFAC yes 5648221
chr3 128955301 128955314 ZBTB18 JASPAR yes 5648222
chr3 128955302 128955314 PKNOX1 JASPAR yes 5648223
chr3 128955302 128955314 TGIF1 JASPAR yes 5648224
chr3 128955303 128955312 SNAI2 JASPAR yes 5648225
chr3 128955303 128955313 FIGLA JASPAR yes 5648226
chr3 128955303 128955313 ID4 JASPAR yes 5648227
chr3 128955303 128955313 TCF3 JASPAR yes 5648228
chr3 128955303 128955313 TCF4 JASPAR yes 5648229
chr3 128955305 128955314 ZEB1 JASPAR yes 5648230
chr3 128955305 128955315 TBX21 JASPAR yes 5648231
chr3 128955306 128955314 MGA JASPAR yes 5648232
chr3 128955306 128955314 TBX15 JASPAR yes 5648233
chr3 128955306 128955314 TBX1 JASPAR yes 5648234
chr3 128955306 128955314 TBX4 JASPAR yes 5648235
chr3 128955306 128955314 TBX5 JASPAR yes 5648236
chr3 128955306 128955316 TBR1 JASPAR yes 5648237
chr3 128955306 128955319 SMAD2 JASPAR yes 5648238
Genes associated with rs188905696[chr3:128955309], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More