EnhancerDB
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  3. rs188918009[chr1:112059588]
Enhancers that have rs188918009[chr1:112059588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112044245 112062755 enh565
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188918009[chr1:112059588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 21329352
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 107822230
chr1 112058541 112059670 P63 GTRD no Skin (Keratinocyte) 107822231
chr1 112058724 112059660 ZNF143 GTRD no Epithelial (MCF-7) 21329358
chr1 112058724 112059660 ZNF143 GTRD no Epithelial (MCF-7) 107822242
chr1 112058753 112059593 P63 GTRD no Skin (Keratinocyte) 21329360
chr1 112058753 112059593 P63 GTRD no Skin (Keratinocyte) 107822244
chr1 112058881 112059617 ZNF274 GTRD no Cervix (HeLa-S3) 21329366
chr1 112058881 112059617 ZNF274 GTRD no Cervix (HeLa-S3) 107822253
chr1 112058890 112059637 ZNF274 GTRD no Bone Marrow (K562) 21329368
chr1 112058890 112059637 ZNF274 GTRD no Bone Marrow (K562) 107822255
chr1 112058911 112059700 ZBTB33 GTRD no Lung (A549) 107822256
chr1 112058949 112059675 ZNF143 GTRD no Epithelial (MCF-7) 21329371
chr1 112058949 112059675 ZNF143 GTRD no Epithelial (MCF-7) 107822259
chr1 112059583 112059588 ETS2 TRANSFAC yes 31525369
chr1 112059584 112059602 IRF2 JASPAR yes 31525370
Genes associated with rs188918009[chr1:112059588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More