EnhancerDB
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  3. rs1889393[chr6:12355846]
Enhancers that have rs1889393[chr6:12355846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs1889393[chr6:12355846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12355837 12355855 ESR2 JASPAR yes 99965300
chr6 12355838 12355853 ESR2 JASPAR yes 99965301
chr6 12355846 12355860 RORA JASPAR yes 99965302
Genes associated with rs1889393[chr6:12355846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More