EnhancerDB
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  3. rs188962061[chr9:37408990]
Enhancers that have rs188962061[chr9:37408990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 37388545 37417602 enh10754
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr9 37408940 37409704 vista61918
VISTA
Transcript factors that have rs188962061[chr9:37408990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 37408597 37409948 POLR2A UCSC Txn Factor no Conserved 108550386
chr9 37408805 37409745 PML UCSC Txn Factor no Conserved 108550387
chr9 37408869 37409826 NFIC UCSC Txn Factor no Conserved 108550388
chr9 37408871 37409762 RUNX3 UCSC Txn Factor no Conserved 108550389
chr9 37408928 37409743 FOXM1 UCSC Txn Factor no Conserved 108550390
chr9 37408982 37408992 FIGLA JASPAR yes 83996398
chr9 37408982 37408992 FIGLA JASPAR yes 95351004
chr9 37408990 37409009 PAX5 JASPAR yes 83996399
chr9 37408990 37409009 PAX5 JASPAR yes 95351005
Genes associated with rs188962061[chr9:37408990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More