EnhancerDB
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  3. rs188979828[chr17:62981744]
Enhancers that have rs188979828[chr17:62981744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs188979828[chr17:62981744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62981151 62981814 TCF7L2 UCSC Txn Factor no Conserved 108283124
chr17 62981218 62981814 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21780724
chr17 62981218 62981814 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108283131
chr17 62981237 62981807 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780726
chr17 62981237 62981807 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108283133
chr17 62981267 62981771 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780729
chr17 62981267 62981771 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108283136
chr17 62981387 62982344 ZNF143 GTRD no Epithelial (MCF-7) 21780741
chr17 62981387 62982344 ZNF143 GTRD no Epithelial (MCF-7) 108283149
chr17 62981387 62982344 ZNF143 GTRD no Epithelial (MCF-7) 108283150
chr17 62981668 62982100 ZNF143 GTRD no Epithelial (MCF-7) 21780746
chr17 62981668 62982100 ZNF143 GTRD no Epithelial (MCF-7) 108283153
chr17 62981700 62982467 ZNF143 GTRD no Epithelial (MCF-7) 21780747
chr17 62981700 62982467 ZNF143 GTRD no Epithelial (MCF-7) 108283154
chr17 62981704 62982132 ZNF143 GTRD no Epithelial (MCF-7) 21780748
chr17 62981704 62982132 ZNF143 GTRD no Epithelial (MCF-7) 108283155
chr17 62981710 62982481 ZNF143 GTRD no Epithelial (MCF-7) 21780749
chr17 62981710 62982481 ZNF143 GTRD no Epithelial (MCF-7) 108283156
chr17 62981730 62981745 PRDM1 JASPAR yes 55335407
chr17 62981736 62981747 ELK4 JASPAR yes 55335409
chr17 62981736 62981747 FLI1 JASPAR yes 55335410
chr17 62981736 62981749 ELF3 JASPAR yes 55335411
chr17 62981737 62981747 ETV6 JASPAR yes 55335412
chr17 62981737 62981748 ELF5 JASPAR yes 55335413
chr17 62981737 62981749 ELF4 JASPAR yes 55335414
chr17 62981737 62981750 ELF1 JASPAR yes 55335415
chr17 62981737 62981752 STAT1 JASPAR yes 55335416
chr17 62981737 62982341 ZBTB33 GTRD no Lung (A549) 21780750
chr17 62981737 62982341 ZBTB33 GTRD no Lung (A549) 108283157
chr17 62981738 62981745 SPI1 JASPAR yes 55335417
chr17 62981738 62981746 EHF JASPAR yes 55335418
chr17 62981738 62981746 FEV JASPAR yes 55335419
chr17 62981739 62981750 STAT3 JASPAR yes 55335420
Genes associated with rs188979828[chr17:62981744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More