EnhancerDB
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  3. rs188980998[chr6:30738699]
Enhancers that have rs188980998[chr6:30738699]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs188980998[chr6:30738699]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30738694 30738699 SP1 TRANSFAC yes 101047054
chr6 30738694 30738709 HNF4A JASPAR yes 101047055
chr6 30738695 30738709 NR2F1 JASPAR yes 101047056
chr6 30738695 30738710 HNF4G JASPAR yes 101047057
Genes associated with rs188980998[chr6:30738699], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More