EnhancerDB
  1. Home
  2. SNP
  3. rs189047652[chr16:85582196]
Enhancers that have rs189047652[chr16:85582196]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189047652[chr16:85582196]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85580040 85582876 ZNF143 GTRD no Epithelial (MCF-7) 21728618
chr16 85580440 85582297 ZNF274 GTRD no Bone Marrow (K562) 21728625
chr16 85580739 85582335 ZNF274 GTRD no Bone Marrow (K562) 21728627
chr16 85581547 85584240 TCF7L2 GTRD no Colon (HCT116) 21728643
chr16 85581606 85582653 TCF7L2 GTRD no Colon (HCT116) 21728644
chr16 85581629 85582889 TCF7L2 GTRD no Colon (HCT116) 21728645
chr16 85581683 85583875 ZNF274 GTRD no Bone Marrow (K562) 21728646
chr16 85581748 85582646 TCF7L2 GTRD no Colon (HCT116) 21728647
chr16 85581994 85583977 ZNF274 GTRD no Bone Marrow (K562) 21728648
chr16 85582033 85582534 ZNF274 GTRD no Bone Marrow (K562) 21728649
chr16 85582104 85582711 ZNF274 GTRD no Bone Marrow (K562) 21728650
chr16 85582175 85582493 ZNF274 GTRD no Bone Marrow (K562) 21728651
chr16 85582188 85582537 ZNF274 GTRD no Bone Marrow (K562) 21728652
chr16 85582189 85582200 HOXC13 JASPAR yes 12075084
chr16 85582189 85582200 HOXD12 JASPAR yes 12075085
Genes associated with rs189047652[chr16:85582196], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More