EnhancerDB
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  3. rs189130216[chr1:206879633]
Enhancers that have rs189130216[chr1:206879633]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs189130216[chr1:206879633]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206879627 206879646 RFX2 JASPAR yes 34820010
chr1 206879629 206879644 RFX5 JASPAR yes 34820011
chr1 206879633 206879648 RUNX2 JASPAR yes 34820012
Genes associated with rs189130216[chr1:206879633], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More