EnhancerDB
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  3. rs189207097[chr1:232756932]
Enhancers that have rs189207097[chr1:232756932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232753930 232757436 vista147
VISTA
Transcript factors that have rs189207097[chr1:232756932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232756927 232756942 RUNX2 JASPAR yes 36178292
chr1 232756927 232756942 RUNX2 JASPAR yes 71162873
chr1 232756928 232756938 RUNX3 JASPAR yes 36178293
chr1 232756928 232756938 RUNX3 JASPAR yes 71162874
chr1 232756931 232756951 RREB1 JASPAR yes 36178294
chr1 232756931 232756951 RREB1 JASPAR yes 71162875
chr1 232756932 232756940 HOXA5 JASPAR yes 36178295
chr1 232756932 232756940 HOXA5 JASPAR yes 71162876
Genes associated with rs189207097[chr1:232756932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More