EnhancerDB
  1. Home
  2. SNP
  3. rs189258969[chr1:231533631]
Enhancers that have rs189258969[chr1:231533631]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189258969[chr1:231533631]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231533621 231533635 GATA2 JASPAR yes 36089391
chr1 231533623 231533631 GATA3 JASPAR yes 36089392
chr1 231533623 231533631 GATA5 JASPAR yes 36089393
Genes associated with rs189258969[chr1:231533631], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More