EnhancerDB
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  3. rs189295562[chr2:25513896]
Enhancers that have rs189295562[chr2:25513896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189295562[chr2:25513896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25513891 25513901 BHLHE40 JASPAR yes 72462467
chr2 25513891 25513901 BHLHE41 JASPAR yes 72462468
chr2 25513891 25513901 HEY1 JASPAR yes 72462469
chr2 25513891 25513901 HEY2 JASPAR yes 72462470
chr2 25513891 25513901 MLXIPL JASPAR yes 72462471
chr2 25513891 25513901 MLX JASPAR yes 72462472
chr2 25513891 25513901 MNT JASPAR yes 72462473
chr2 25513891 25513901 TFE3 JASPAR yes 72462474
chr2 25513893 25513898 MYC TRANSFAC yes 72462475
chr2 25513893 25513898 USF1 TRANSFAC yes 72462476
chr2 25513893 25513898 USF2 TRANSFAC yes 72462477
chr2 25513894 25513909 TP53 JASPAR yes 72462478
Genes associated with rs189295562[chr2:25513896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More