EnhancerDB
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  3. rs189320410[chr1:53488915]
Enhancers that have rs189320410[chr1:53488915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53487285 53493435 enh11855
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Adrenal Uterus Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs189320410[chr1:53488915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53488902 53488916 TCF7L2 JASPAR yes 28909349
chr1 53488902 53488917 LEF1 JASPAR yes 28909350
chr1 53488913 53488921 TBX5 JASPAR yes 28909352
chr1 53488913 53488922 ZEB1 JASPAR yes 28909353
chr1 53488913 53488925 PKNOX1 JASPAR yes 28909354
chr1 53488913 53488928 SCRT1 JASPAR yes 28909355
chr1 53488914 53488924 FIGLA JASPAR yes 28909356
chr1 53488914 53488924 ID4 JASPAR yes 28909357
chr1 53488914 53488924 TCF3 JASPAR yes 28909358
chr1 53488914 53488924 TCF4 JASPAR yes 28909359
chr1 53488915 53488924 SNAI2 JASPAR yes 28909360
Genes associated with rs189320410[chr1:53488915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More