EnhancerDB
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  3. rs189327344[chr16:11423957]
Enhancers that have rs189327344[chr16:11423957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
Transcript factors that have rs189327344[chr16:11423957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 21690661
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181637
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181638
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 21690668
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181649
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181650
chr16 11422670 11425487 ZNF143 GTRD no Epithelial (MCF-7) 21690669
chr16 11422670 11425487 ZNF143 GTRD no Epithelial (MCF-7) 108181651
chr16 11423161 11424520 ZNF274 GTRD no Blood (GM12878) 21690676
chr16 11423161 11424520 ZNF274 GTRD no Blood (GM12878) 108181664
chr16 11423194 11424130 ZNF274 GTRD no Blood (GM12878) 21690677
chr16 11423194 11424130 ZNF274 GTRD no Blood (GM12878) 108181665
chr16 11423202 11424043 TCF7L2 GTRD no Colon (HCT116) 108181666
chr16 11423215 11424056 ZNF274 GTRD no Blood (GM12878) 21690678
chr16 11423215 11424056 ZNF274 GTRD no Blood (GM12878) 108181667
chr16 11423215 11424417 ZNF274 GTRD no Blood (GM12878) 21690679
chr16 11423215 11424417 ZNF274 GTRD no Blood (GM12878) 108181668
chr16 11423948 11423960 FOXI1 JASPAR yes 9506364
chr16 11423955 11423959 YY1 TRANSFAC yes 9506365
chr16 11423956 11423966 NFATC3 JASPAR yes 9506366
chr16 11423957 11423964 NFATC2 JASPAR yes 9506367
Genes associated with rs189327344[chr16:11423957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More