EnhancerDB
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  3. rs189399816[chr2:228276298]
Enhancers that have rs189399816[chr2:228276298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189399816[chr2:228276298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228275955 228276504 NFIC UCSC Txn Factor no Conserved 108435515
chr2 228275986 228276452 RUNX3 UCSC Txn Factor no Conserved 108435516
chr2 228276074 228276501 RELA UCSC Txn Factor no Conserved 108435517
chr2 228276133 228276454 EBF1 UCSC Txn Factor no Conserved 108435518
chr2 228276296 228276302 NFIC JASPAR yes 81520406
Genes associated with rs189399816[chr2:228276298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More