EnhancerDB
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  3. rs189404109[chr17:10023418]
Enhancers that have rs189404109[chr17:10023418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr17 10023147 10023510 vista23985
VISTA
Transcript factors that have rs189404109[chr17:10023418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10023111 10023421 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21742901
chr17 10023111 10023421 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108239070
chr17 10023128 10023452 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108239073
chr17 10023143 10023423 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21742904
chr17 10023143 10023423 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108239075
chr17 10023408 10023426 RARA JASPAR yes 21198829
chr17 10023408 10023426 RARA JASPAR yes 53089410
chr17 10023415 10023425 SP1 JASPAR yes 21198831
chr17 10023415 10023425 SP1 JASPAR yes 53089412
chr17 10023416 10023426 SP1 JASPAR yes 21198832
chr17 10023416 10023426 SP1 JASPAR yes 53089413
chr17 10023418 10023424 NFE2 TRANSFAC yes 21198833
chr17 10023418 10023424 NFE2 TRANSFAC yes 53089414
Genes associated with rs189404109[chr17:10023418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More