EnhancerDB
  1. Home
  2. SNP
  3. rs189477959[chr2:38930440]
Enhancers that have rs189477959[chr2:38930440]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189477959[chr2:38930440]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38930433 38930453 TP63 JASPAR yes 73167351
chr2 38930434 38930452 TP53 JASPAR yes 73167352
chr2 38930434 38930452 TP73 JASPAR yes 73167353
Genes associated with rs189477959[chr2:38930440], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More