EnhancerDB
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  3. rs189478669[chr12:121297518]
Enhancers that have rs189478669[chr12:121297518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs189478669[chr12:121297518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121297513 121297518 SP1 TRANSFAC yes 124190988
chr12 121297514 121297519 SP1 TRANSFAC yes 124190989
chr12 121297517 121297530 NFKB1 JASPAR yes 124190990
Genes associated with rs189478669[chr12:121297518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More