EnhancerDB
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  3. rs189524564[chr19:2539917]
Enhancers that have rs189524564[chr19:2539917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189524564[chr19:2539917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2539896 2539917 ZNF263 JASPAR yes 112071591
chr19 2539898 2539919 ZNF263 JASPAR yes 112071592
chr19 2539899 2539920 ZNF263 JASPAR yes 112071593
chr19 2539900 2539921 ZNF263 JASPAR yes 112071595
chr19 2539901 2539922 IRF1 JASPAR yes 112071596
chr19 2539902 2539923 ZNF263 JASPAR yes 112071597
chr19 2539905 2539926 ZNF263 JASPAR yes 112071599
chr19 2539906 2539927 ZNF263 JASPAR yes 112071600
chr19 2539907 2539928 IRF1 JASPAR yes 112071601
chr19 2539909 2539924 PRDM1 JASPAR yes 112071602
chr19 2539909 2539924 STAT2 JASPAR yes 112071603
chr19 2539909 2539930 ZNF263 JASPAR yes 112071604
chr19 2539910 2539924 STAT1 JASPAR yes 112071605
chr19 2539911 2539925 IRF7 JASPAR yes 112071606
chr19 2539911 2539925 IRF8 JASPAR yes 112071607
chr19 2539911 2539926 IRF9 JASPAR yes 112071608
chr19 2539911 2539932 IRF1 JASPAR yes 112071609
chr19 2539912 2539933 ZNF263 JASPAR yes 112071610
chr19 2539913 2539934 IRF1 JASPAR yes 112071611
chr19 2539915 2539936 ZNF263 JASPAR yes 112071612
chr19 2539917 2539938 ZNF263 JASPAR yes 112071613
Genes associated with rs189524564[chr19:2539917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More