EnhancerDB
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  3. rs189552441[chr1:45171245]
Enhancers that have rs189552441[chr1:45171245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45170697 45189455 enh312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs189552441[chr1:45171245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45171235 45171247 POU2F1 JASPAR yes 28575100
chr1 45171236 45171248 POU3F1 JASPAR yes 28575101
chr1 45171236 45171248 POU3F2 JASPAR yes 28575102
chr1 45171237 45171246 POU3F4 JASPAR yes 28575103
chr1 45171237 45171246 POU5F1B JASPAR yes 28575104
chr1 45171245 45171253 FOXO3 JASPAR yes 28575105
chr1 45171245 45171255 NFATC3 JASPAR yes 28575106
Genes associated with rs189552441[chr1:45171245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More