EnhancerDB
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  3. rs189553370[chr6:33552500]
Enhancers that have rs189553370[chr6:33552500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs189553370[chr6:33552500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33552495 33552505 GSC2 JASPAR yes 101157195
chr6 33552495 33552505 GSC JASPAR yes 101157196
chr6 33552496 33552504 OTX1 JASPAR yes 101157197
chr6 33552496 33552505 PITX3 JASPAR yes 101157198
Genes associated with rs189553370[chr6:33552500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More