EnhancerDB
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  3. rs189561077[chr17:78760860]
Enhancers that have rs189561077[chr17:78760860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs189561077[chr17:78760860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78760858 78760867 ZEB1 JASPAR yes 56279515
chr17 78760859 78760869 ID4 JASPAR yes 56279516
chr17 78760859 78760869 NHLH1 JASPAR yes 56279517
chr17 78760859 78760869 TCF3 JASPAR yes 56279518
chr17 78760859 78760869 TCF4 JASPAR yes 56279519
chr17 78760860 78760869 SNAI2 JASPAR yes 56279520
Genes associated with rs189561077[chr17:78760860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More