EnhancerDB
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  3. rs189585175[chr17:55501991]
Enhancers that have rs189585175[chr17:55501991]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189585175[chr17:55501991]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55501555 55502011 ZNF274 GTRD no Liver (HepG2) 21773516
chr17 55501555 55502011 ZNF274 GTRD no Liver (HepG2) 108273983
chr17 55501562 55502045 ZNF143 GTRD no Epithelial (MCF-7) 108273984
chr17 55501660 55502057 TCF7L2 GTRD no Colon (HCT116) 108273985
chr17 55501661 55502000 TCF7L2 GTRD no Colon (HCT116) 108273986
chr17 55501668 55502047 TCF7L2 GTRD no Colon (HCT116) 108273987
chr17 55501748 55502039 ZNF143 GTRD no Epithelial (MCF-7) 108273988
chr17 55501980 55501992 NHLH1 JASPAR yes 54954069
chr17 55501981 55501991 MSC JASPAR yes 54954070
chr17 55501981 55501991 NHLH1 JASPAR yes 54954071
chr17 55501981 55501991 TFAP4 JASPAR yes 54954072
Genes associated with rs189585175[chr17:55501991], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More