EnhancerDB
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Enhancers that have rs189617417[chr1:201507845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs189617417[chr1:201507845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201504923 201508385 ZNF274 GTRD no Cervix (HeLa-S3) 21364520
chr1 201505073 201508220 ZNF274 GTRD no Cervix (HeLa-S3) 21364523
chr1 201505228 201509085 ZNF143 GTRD no Epithelial (MCF-7) 107856609
chr1 201505284 201508115 ZNF274 GTRD no Cervix (HeLa-S3) 21364529
chr1 201506116 201507863 ERG GTRD no Prostate (RWPE1) 21364541
chr1 201506364 201508107 ZNF274 GTRD no Cervix (HeLa-S3) 21364548
chr1 201506463 201508231 ZNF274 GTRD no Cervix (HeLa-S3) 21364551
chr1 201507652 201509722 POLR2A UCSC Txn Factor no Conserved 107856610
chr1 201507736 201508116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364571
chr1 201507831 201507850 CTCF JASPAR yes 34503997
Genes associated with rs189617417[chr1:201507845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More