EnhancerDB
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  3. rs189664267[chr1:54849322]
Enhancers that have rs189664267[chr1:54849322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs189664267[chr1:54849322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54849320 54849331 CDX2 JASPAR yes 28980869
chr1 54849321 54849332 HOXA10 JASPAR yes 28980870
chr1 54849322 54849331 CDX1 JASPAR yes 28980871
chr1 54849322 54849332 HOXA13 JASPAR yes 28980872
chr1 54849322 54849332 HOXD13 JASPAR yes 28980873
chr1 54849322 54849338 POU4F3 JASPAR yes 28980874
Genes associated with rs189664267[chr1:54849322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More