EnhancerDB
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  3. rs189702478[chr17:48286864]
Enhancers that have rs189702478[chr17:48286864]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189702478[chr17:48286864]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48286690 48287246 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769590
chr17 48286822 48287178 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769591
chr17 48286830 48287059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769592
chr17 48286839 48287079 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21769593
chr17 48286842 48287121 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21769594
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270622
chr17 48286842 48288527 POLR2A UCSC Txn Factor no Conserved 108270623
chr17 48286863 48286876 NFKB1 JASPAR yes 54687021
Genes associated with rs189702478[chr17:48286864], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More