EnhancerDB
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  3. rs189716670[chr6:35566792]
Enhancers that have rs189716670[chr6:35566792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189716670[chr6:35566792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35566771 35566792 IRF1 JASPAR yes 101293695
chr6 35566777 35566798 IRF1 JASPAR yes 101293703
chr6 35566778 35566793 FOXP1 JASPAR yes 101293704
chr6 35566781 35566795 SPIC JASPAR yes 101293706
chr6 35566781 35566796 PRDM1 JASPAR yes 101293707
chr6 35566781 35566796 STAT2 JASPAR yes 101293708
chr6 35566783 35566804 IRF1 JASPAR yes 101293709
Genes associated with rs189716670[chr6:35566792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More