EnhancerDB
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  3. rs189742258[chr12:56440674]
Enhancers that have rs189742258[chr12:56440674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs189742258[chr12:56440674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56440571 56440950 SOX2 GTRD no Neural Stem Cells (H9) 21550922
chr12 56440584 56440824 ZNF274 GTRD no Bone Marrow (K562) 21550923
chr12 56440671 56440682 ELK4 JASPAR yes 121087333
chr12 56440671 56440684 ELF3 JASPAR yes 121087334
chr12 56440672 56440682 ELK1 JASPAR yes 121087335
chr12 56440672 56440682 ELK3 JASPAR yes 121087336
chr12 56440672 56440682 ERG JASPAR yes 121087337
chr12 56440672 56440682 ETS1 JASPAR yes 121087338
chr12 56440672 56440682 ETV1 JASPAR yes 121087339
chr12 56440672 56440682 ETV3 JASPAR yes 121087340
chr12 56440672 56440682 ETV4 JASPAR yes 121087341
chr12 56440672 56440682 ETV5 JASPAR yes 121087342
chr12 56440672 56440682 FEV JASPAR yes 121087343
chr12 56440672 56440682 FLI1 JASPAR yes 121087344
chr12 56440672 56440683 ELF5 JASPAR yes 121087345
chr12 56440672 56440684 EHF JASPAR yes 121087346
chr12 56440672 56440684 ELF1 JASPAR yes 121087347
chr12 56440672 56440684 ELF4 JASPAR yes 121087348
chr12 56440672 56440685 ELF1 JASPAR yes 121087349
chr12 56440673 56440681 FEV JASPAR yes 121087350
chr12 56440673 56440682 ELK4 JASPAR yes 121087351
chr12 56440674 56440680 ETS1 JASPAR yes 121087352
chr12 56440674 56440680 SPI1 JASPAR yes 121087353
chr12 56440674 56440684 ELK1 JASPAR yes 121087354
Genes associated with rs189742258[chr12:56440674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More