EnhancerDB
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  3. rs189771540[chr11:65885340]
Enhancers that have rs189771540[chr11:65885340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65862700 65887735 enh1831
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189771540[chr11:65885340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65885320 65885341 IRF1 JASPAR yes 39352334
chr11 65885321 65885342 IRF1 JASPAR yes 39352336
chr11 65885332 65885344 TAL1 JASPAR yes 39352338
chr11 65885335 65885347 FOXI1 JASPAR yes 39352339
Genes associated with rs189771540[chr11:65885340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More