EnhancerDB
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  3. rs189777907[chr1:204250352]
Enhancers that have rs189777907[chr1:204250352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189777907[chr1:204250352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204250340 204250361 IRF1 JASPAR yes 34687532
chr1 204250342 204250362 RREB1 JASPAR yes 34687533
chr1 204250343 204250357 ONECUT3 JASPAR yes 34687534
chr1 204250345 204250357 IRF1 JASPAR yes 34687535
chr1 204250345 204250360 RUNX2 JASPAR yes 34687536
chr1 204250346 204250361 MEF2C JASPAR yes 34687537
chr1 204250346 204250366 RREB1 JASPAR yes 34687538
chr1 204250348 204250368 RREB1 JASPAR yes 34687539
chr1 204250350 204250365 FOXP1 JASPAR yes 34687540
chr1 204250351 204250362 FOXA1 JASPAR yes 34687541
chr1 204250351 204250366 FOXA1 JASPAR yes 34687542
chr1 204250352 204250364 FOXC2 JASPAR yes 34687543
chr1 204250352 204250372 RREB1 JASPAR yes 34687544
Genes associated with rs189777907[chr1:204250352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More