EnhancerDB
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  3. rs189778479[chr2:228285082]
Enhancers that have rs189778479[chr2:228285082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189778479[chr2:228285082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228285075 228285087 IRF1 JASPAR yes 81521757
chr2 228285075 228285089 IRF7 JASPAR yes 81521758
chr2 228285075 228285090 IRF9 JASPAR yes 81521759
Genes associated with rs189778479[chr2:228285082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More