EnhancerDB
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  3. rs189783581[chr1:225945371]
Enhancers that have rs189783581[chr1:225945371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189783581[chr1:225945371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225941037 225946019 STAT3 GTRD no Blood (OCI-LY7) 21385734
chr1 225945273 225946593 SOX2 GTRD no Neural Stem Cells (H9) 21385784
chr1 225945323 225946584 SOX2 GTRD no Neural Stem Cells (H9) 21385785
chr1 225945339 225946552 SOX2 GTRD no Neural Stem Cells (H9) 21385786
chr1 225945354 225945373 PAX5 JASPAR yes 35768069
chr1 225945366 225946083 SOX2 GTRD no Neural Stem Cells (H9) 21385787
Genes associated with rs189783581[chr1:225945371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More