EnhancerDB
  1. Home
  2. SNP
  3. rs189808977[chr17:40556648]
Enhancers that have rs189808977[chr17:40556648]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189808977[chr17:40556648]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40546814 40566881 ZNF274 GTRD no Blood (GM12878) 108260637
chr17 40546874 40564174 ZBTB33 GTRD no Lung (A549) 108260638
chr17 40546896 40561581 ZBTB33 GTRD no Lung (A549) 108260639
chr17 40546905 40566597 ZNF274 GTRD no Blood (GM12878) 108260640
chr17 40546941 40565998 ZNF274 GTRD no Blood (GM12878) 108260641
chr17 40546985 40566407 ZNF274 GTRD no Blood (GM12878) 108260642
chr17 40556124 40562016 ZBTB33 GTRD no Lung (A549) 108260643
chr17 40556638 40556659 ZNF263 JASPAR yes 54301827
chr17 40556639 40556660 IRF1 JASPAR yes 54301828
chr17 40556641 40556662 ZNF263 JASPAR yes 54301829
chr17 40556642 40556656 IRF8 JASPAR yes 54301830
chr17 40556645 40556666 IRF1 JASPAR yes 54301831
chr17 40556648 40556662 IRF8 JASPAR yes 54301832
Genes associated with rs189808977[chr17:40556648], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More