EnhancerDB
  1. Home
  2. SNP
  3. rs189854640[chr17:27972512]
Enhancers that have rs189854640[chr17:27972512]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189854640[chr17:27972512]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27972501 27972521 RREB1 JASPAR yes 53745212
chr17 27972505 27972515 HOXA13 JASPAR yes 53745213
chr17 27972509 27972515 TBP TRANSFAC yes 53745215
chr17 27972511 27972531 RREB1 JASPAR yes 53745216
Genes associated with rs189854640[chr17:27972512], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More