EnhancerDB
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  3. rs189866007[chr1:8533840]
Enhancers that have rs189866007[chr1:8533840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189866007[chr1:8533840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8532771 8534523 ZNF274 GTRD no Blood (GM12878) 107801978
chr1 8533835 8533856 IRF1 JASPAR yes 26559351
chr1 8533839 8533853 STAT1 JASPAR yes 26559352
chr1 8533839 8533854 PRDM1 JASPAR yes 26559353
chr1 8533839 8533854 STAT2 JASPAR yes 26559354
Genes associated with rs189866007[chr1:8533840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More