EnhancerDB
  1. Home
  2. SNP
  3. rs189944657[chr2:232486471]
Enhancers that have rs189944657[chr2:232486471]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189944657[chr2:232486471]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232486454 232486474 RREB1 JASPAR yes 81727291
chr2 232486455 232486476 ZNF263 JASPAR yes 81727293
chr2 232486462 232486476 PLAG1 JASPAR yes 81727294
chr2 232486464 232486478 GLIS2 JASPAR yes 81727295
chr2 232486464 232486485 ZNF263 JASPAR yes 81727296
chr2 232486471 232486478 SP1 TRANSFAC yes 81727297
chr2 232486471 232486481 SP1 JASPAR yes 81727298
Genes associated with rs189944657[chr2:232486471], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More