EnhancerDB
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  3. rs189946904[chr12:125170647]
Enhancers that have rs189946904[chr12:125170647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189946904[chr12:125170647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125170335 125170991 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21581713
chr12 125170385 125170901 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581714
chr12 125170457 125170841 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581715
chr12 125170474 125170944 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21581716
chr12 125170496 125170952 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581717
chr12 125170539 125170879 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581718
chr12 125170555 125170885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581719
chr12 125170583 125170863 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581720
chr12 125170595 125170859 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581721
chr12 125170596 125170840 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581722
chr12 125170640 125170651 ESRRA JASPAR yes 124408610
chr12 125170640 125170651 ESRRB JASPAR yes 124408611
chr12 125170640 125170653 NR2F1 JASPAR yes 124408612
chr12 125170642 125170650 NR4A2 JASPAR yes 124408613
chr12 125170644 125170648 ESR1 TRANSFAC yes 124408614
Genes associated with rs189946904[chr12:125170647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More