EnhancerDB
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  3. rs189959363[chr17:49026413]
Enhancers that have rs189959363[chr17:49026413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189959363[chr17:49026413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49025864 49027065 ZNF143 GTRD no Epithelial (MCF-7) 21771611
chr17 49026236 49026457 ZNF274 GTRD no Bone Marrow (K562) 21771612
chr17 49026236 49026555 ZNF274 GTRD no Bone Marrow (K562) 21771613
chr17 49026344 49026791 FLI1 GTRD no Muscle (A673) 21771614
chr17 49026365 49026895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771615
chr17 49026409 49026925 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771616
chr17 49026410 49026415 ATF1 TRANSFAC yes 54737956
Genes associated with rs189959363[chr17:49026413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More