EnhancerDB
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  3. rs189986538[chr6:12349844]
Enhancers that have rs189986538[chr6:12349844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs189986538[chr6:12349844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12349835 12349850 LEF1 JASPAR yes 99964392
chr6 12349836 12349850 TCF7L2 JASPAR yes 99964393
chr6 12349839 12349845 LEF1 TRANSFAC yes 99964394
chr6 12349839 12349845 SOX10 JASPAR yes 99964395
Genes associated with rs189986538[chr6:12349844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More