EnhancerDB
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  3. rs190008546[chr1:206880777]
Enhancers that have rs190008546[chr1:206880777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs190008546[chr1:206880777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206880773 206880792 RFX2 JASPAR yes 34820172
chr1 206880777 206880793 RFX2 JASPAR yes 34820173
chr1 206880777 206880793 RFX3 JASPAR yes 34820174
chr1 206880777 206880793 RFX4 JASPAR yes 34820175
chr1 206880777 206880793 RFX5 JASPAR yes 34820176
Genes associated with rs190008546[chr1:206880777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More