EnhancerDB
  1. Home
  2. SNP
  3. rs190009477[chr1:179001808]
Enhancers that have rs190009477[chr1:179001808]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs190009477[chr1:179001808]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179001801 179001811 EMX1 JASPAR yes 33462105
chr1 179001801 179001811 EMX2 JASPAR yes 33462106
chr1 179001801 179001811 ESX1 JASPAR yes 33462107
chr1 179001801 179001811 EVX1 JASPAR yes 33462108
chr1 179001801 179001811 EVX2 JASPAR yes 33462109
chr1 179001801 179001811 GBX1 JASPAR yes 33462110
chr1 179001801 179001811 HESX1 JASPAR yes 33462111
chr1 179001801 179001811 HOXA2 JASPAR yes 33462112
chr1 179001801 179001811 HOXB2 JASPAR yes 33462113
chr1 179001801 179001811 HOXB3 JASPAR yes 33462114
chr1 179001801 179001811 LBX2 JASPAR yes 33462115
chr1 179001801 179001811 LHX2 JASPAR yes 33462116
chr1 179001801 179001811 LHX6 JASPAR yes 33462117
chr1 179001801 179001811 MEOX1 JASPAR yes 33462118
chr1 179001801 179001811 MEOX2 JASPAR yes 33462119
chr1 179001801 179001811 NOTO JASPAR yes 33462120
chr1 179001801 179001811 RAX JASPAR yes 33462121
chr1 179001802 179001810 LBX1 JASPAR yes 33462122
chr1 179001802 179001810 PDX1 JASPAR yes 33462123
chr1 179001802 179001810 VAX1 JASPAR yes 33462124
chr1 179001802 179001810 VAX2 JASPAR yes 33462125
chr1 179001802 179001810 VSX1 JASPAR yes 33462126
chr1 179001802 179001810 VSX2 JASPAR yes 33462127
chr1 179001802 179001812 POU6F2 JASPAR yes 33462128
Genes associated with rs190009477[chr1:179001808], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More