EnhancerDB
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  3. rs190062006[chr16:87490220]
Enhancers that have rs190062006[chr16:87490220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190062006[chr16:87490220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87489245 87492157 ZNF274 GTRD no Liver (HepG2) 21733328
chr16 87489245 87492157 ZNF274 GTRD no Liver (HepG2) 108219266
chr16 87489430 87491223 ZNF274 GTRD no Liver (HepG2) 21733329
chr16 87489430 87491223 ZNF274 GTRD no Liver (HepG2) 108219267
chr16 87489873 87491214 ZNF274 GTRD no Bone Marrow (K562) 21733330
chr16 87489873 87491214 ZNF274 GTRD no Bone Marrow (K562) 108219268
chr16 87489938 87491435 ZNF274 GTRD no Bone Marrow (K562) 21733331
chr16 87489938 87491435 ZNF274 GTRD no Bone Marrow (K562) 108219269
chr16 87489958 87491588 ZNF274 GTRD no Bone Marrow (K562) 21733332
chr16 87489958 87491588 ZNF274 GTRD no Bone Marrow (K562) 108219270
chr16 87490157 87491298 ZNF274 GTRD no Bone Marrow (K562) 21733333
chr16 87490157 87491298 ZNF274 GTRD no Bone Marrow (K562) 108219271
chr16 87490205 87490223 NFYA JASPAR yes 12217441
chr16 87490208 87490224 NFYA JASPAR yes 12217442
chr16 87490210 87490220 ALX3 JASPAR yes 12217443
chr16 87490210 87490220 ESX1 JASPAR yes 12217444
chr16 87490210 87490220 GBX1 JASPAR yes 12217445
chr16 87490210 87490220 GBX2 JASPAR yes 12217446
chr16 87490210 87490220 GSX1 JASPAR yes 12217447
chr16 87490210 87490220 GSX2 JASPAR yes 12217448
chr16 87490210 87490220 HESX1 JASPAR yes 12217449
chr16 87490210 87490220 HOXB3 JASPAR yes 12217450
chr16 87490210 87490220 LBX2 JASPAR yes 12217451
chr16 87490210 87490220 LHX2 JASPAR yes 12217452
chr16 87490210 87490220 MIXL1 JASPAR yes 12217453
chr16 87490210 87490220 RAX JASPAR yes 12217454
chr16 87490211 87490220 VENTX JASPAR yes 12217465
chr16 87490211 87490226 NFYB JASPAR yes 12217466
chr16 87490215 87491558 ZNF274 GTRD no Liver (HepG2) 21733334
chr16 87490215 87491558 ZNF274 GTRD no Liver (HepG2) 108219272
Genes associated with rs190062006[chr16:87490220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More